Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827844.1_cds_XP_016503237.1_16800
CDS Infomation

[gene=LOC107821313] [db_xref=GeneID:107821313] [protein=pentatricopeptide repeat-containing protein At2g02750-like] [protein_id=XP_016503237.1] [location=149421..151277] [gbkey=CDS]
Sequence

ATGAAGAATCAAATAACAAAATTGGTAGCCAATGGACTCTACAAAGAAGCCATTAACTTG
TATTCCCAGCTCCACTCTTCTTCTTTTGTTCCCACCAAATTCACCTTCCCCTGTCTCTTC
AATGCCTGCGCCAAGCTAAAGGCTATTCCACAAGGCAAAATACTCCATACCCATTTGATT
AAATACGGATTCGGCACAGATGTATACGCAGCCACATCTCTTACTGATATGTACATGAAA
CTCACCTTAGTGGACAGTGCCTTAAAGATGTTCGACGAAATTCCTCAACCAAATATTGCT
TCAGTAAACGCTACCATTTCTGGGTTTTCCCAAAACGGGTATCATTTTGAAGCTTTTCGG
ATGTTTGGGATGTTATTTAGTAGTTTACAGTTTAAGCCGGATTCGGTTACTATAGCTAGT
ATTTTATCAGGATGTGTGAATAGTAATCATGGCGTTCAAATGCATTGCTGGGCTATAAAG
ATTGGTGTGGAAATGGACATATATGCAGCTACTTCGCTTTTGACTATGTATTTGAATTGT
GCTGATTGTGTTTCTGCTACGAGGTTGTTTGAATTGGTTCAAAATAAGAATGTTGTGTGC
TACAATGCTTTTATTTCTGGGCTGTTGCAAAATGGGGTGGATGAAGTGGTCCTGAGTGTG
TTTAAGGAGATGAAAAAGTCACTAGACGAAGAACCGAATGCAGTGACTTTAATATCTGTT
CTTTCTGCTACTGCTAATCTTAAGAATTTGAAGTTTGGTAGGCAAGTCCATGCGTTTATT
GTGAAAGTCGAGTTACAATCTCATACAATGGTTGGAACTGCACTTGTAGACATGTATTCG
AAATGCGCTTTTTGGTTATGTGCATATGAAATGTTCAAAGAGATGGGTGGCAACAGGAAC
TTGATAACGTGGAATTCGATGATTACTGGAATGATGTTGAATGAGCAAACAGAGAAAGCT
GTTGAGCTTTTCGTGGAATTAGAATTGGAAGGATTGAAACCAGATTCAGCTACATGGAAT
TCAATGATCATTGGGTTTTCTCTGCTGCAAAAAGAGGCTGAAGCTTTTATGTTCTTCAGA
AAAATGCTTTCTGCTGGTGTCATTCCCAGTATGAAATCTATTACTAGTCTTCTGACGGCG
TGCTCGTCTCTATCCTCACTCTTTTGTGGCCAGGAGATTCACGGATATATTCTTAGGGCA
GGAAAATCCATAGATGAATTTGTTGTCACCGCAATTATTGATATGTACATGAAATGTGGG
CAATTTTCTTTGGCACGTAAGGTTTTTGATAAGTTGGAAGTAAAATATGATGATCCAGCT
GTGTGGAATGTGATGATTTCAGGGTATGGAAGGAATGGAGAAGGTGAAGCTGCTTTTGAA
ATGTTCTCTCTGATGCTAAAGGAGAAAGTACAACCAAATTCAGCTACTCTGAATTGCATT
TTGTCTGTGTGCAGCCACGTTGGTAAACTAGAGAAAGCATGGCAAGTTTTTAATTTGATG
ATCACAGATTTGGGCTTAACCCCAACTCTAAAGCAACTTAATATTATGGTTGATCTACTT
GCTCGGTCTGGTCAGCTGGATGAAGCTAGAGAACTATTACAGCTCATTCCCAAACCTTCG
GCATCTGTTTTTGCTTCTTTATTAGCAGCTTCTGAGCACTACTCTAATGCCAAGATGGGA
GAAGAAATGACCAAAAAGCTCTCAGAATTGGAGCCAGAAAACCCTGTTCCCTTTGTAATT
TTATCCAACCTTTATGCTAGACAAGGAAAATGGGGCGATGCTGAACGAATCAGAGAAACA
ATCAATGAAAGGGGACTCGAAAAACTACCAGGCTACAGTTCTGTAGGAGTGACATAA

Peptide Sequence

PEP ID

XP_016503237.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g02750-like [Nicotiana tabacum]
Sequence

MKNQITKLVANGLYKEAINLYSQLHSSSFVPTKFTFPCLFNACAKLKAIPQGKILHTHLI
KYGFGTDVYAATSLTDMYMKLTLVDSALKMFDEIPQPNIASVNATISGFSQNGYHFEAFR
MFGMLFSSLQFKPDSVTIASILSGCVNSNHGVQMHCWAIKIGVEMDIYAATSLLTMYLNC
ADCVSATRLFELVQNKNVVCYNAFISGLLQNGVDEVVLSVFKEMKKSLDEEPNAVTLISV
LSATANLKNLKFGRQVHAFIVKVELQSHTMVGTALVDMYSKCAFWLCAYEMFKEMGGNRN
LITWNSMITGMMLNEQTEKAVELFVELELEGLKPDSATWNSMIIGFSLLQKEAEAFMFFR
KMLSAGVIPSMKSITSLLTACSSLSSLFCGQEIHGYILRAGKSIDEFVVTAIIDMYMKCG
QFSLARKVFDKLEVKYDDPAVWNVMISGYGRNGEGEAAFEMFSLMLKEKVQPNSATLNCI
LSVCSHVGKLEKAWQVFNLMITDLGLTPTLKQLNIMVDLLARSGQLDEARELLQLIPKPS
ASVFASLLAASEHYSNAKMGEEMTKKLSELEPENPVPFVILSNLYARQGKWGDAERIRET
INERGLEKLPGYSSVGVT

Transcript Sequence

Gene sequence data has not been registered.